Who is Who in Phylogenetic Networks

Publications of Sha Zhu     Order by:   Type | Year

Associated keywords

branch-length coalescent explicit-network from-network generation likelihood phylogenetic-network phylogeny Program-Hybrid-coal Program-Hybrid-Lambda Program-PhyloNet simulation software statistical-model uniqueness

Article (Journal)

1 Sha Zhu and James H. Degnan. Displayed Trees Do Not Determine Distinguishability Under the Network Multispecies Coalescent. In SB, Vol. 66(2):283-298, 2017. Keywords: branch length, coalescent, explicit network, from network, likelihood, phylogenetic network, phylogeny, Program Hybrid-coal, Program Hybrid-Lambda, Program PhyloNet, software, uniqueness. Note: presentation available at https://www.youtube.com/watch?v=JLYGTfEZG7g.         2 Sha Zhu, James H. Degnan, Sharyn J. Goldstein and Bjarki Eldon. Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees. In BMCB, Vol. 16(292):1-7, 2015. Keywords: explicit network, from network, phylogenetic network, phylogeny, Program Hybrid-Lambda, simulation, software. Note: http://dx.doi.org/10.1186/s12859-015-0721-y.

PhdThesis

3 Sha Zhu. Stochastic tree models and probabilistic modelling of gene trees of given species networks. PhD thesis, University of Canterbury, New Zealand, 2013. Keywords: from network, generation, phylogenetic network, phylogeny, simulation, statistical model. Note: http://hdl.handle.net/10092/7944.

Misc

4 Sha Zhu, James H. Degnan and Bjarki Eldon. Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees. 2013. Keywords: explicit network, from network, phylogenetic network, phylogeny, Program Hybrid-Lambda, simulation, software. Note: http://arxiv.org/abs/1303.0673.         5 Sha Zhu, James H. Degnan and Mike Steel. Probabilistic modeling of gene trees given species networks. 2011. Keywords: from network, generation, phylogenetic network, phylogeny, statistical model. Note: Poster, http://www.newton.ac.uk/programmes/PLG/Zhu.pdf.