Publications related to 'Program ecceTERA' : Given a dated species tree S, a set of gene trees G, and a set of costs for gene events duplications, transfers and losses, ecceTERA computes the score of a most parsimonious reconciliation (MPR). Source code available at http://mbb.univ-montp2.fr/MBB/uploads/ecceTERA_1_2_4.tar.gz. Software available online at http://mbb.univ-montp2.fr/MBB/subsection/softExec.php?soft=eccetera.
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Associated keywords
duplication explicit-network from-rooted-trees from-species-tree lateral-gene-transfer loss parsimony phylogenetic-network phylogeny polynomial Program-ecceTERA
Article (Journal)
1
photophotophoto
Edwin Jacox, Cédric Chauve, Gergely J. Szöllösi, Yann Ponty and Celine Scornavacca. EcceTERA: comprehensive gene tree-species tree reconciliation using parsimony. In BIO, Vol. 32(13):2056-2058, 2016.
Keywords: duplication, explicit network, from rooted trees, from species tree, lateral gene transfer, loss, parsimony, phylogenetic network, phylogeny, polynomial, Program ecceTERA.
Note: https://doi.org/10.1093/bioinformatics/btw105.
       

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