Who is Who in Phylogenetic Networks

Publications related to 'Program ultra-Net' : ultraNet is an ANSI C program which takes as input two or more rooted phylogenetic trees at the Newick format and outputs a rooted phylogenetic network containing them at the eNewick format. It is available at http://rnc.r.dendai.ac.jp/ultraNet.html   Order by:   Type | Year

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Associated keywords

agreement-forest explicit-network from-rooted-trees phylogenetic-network phylogeny Program-ultra-Net reconstruction

2013

1 Zhi-Zhong Chen and Lusheng Wang. An Ultrafast Tool for Minimum Reticulate Networks. In JCB, Vol. 20(1):38-41, 2013. Keywords: agreement forest, explicit network, from rooted trees, phylogenetic network, phylogeny, Program ultra-Net, reconstruction. Note: http://www.cs.cityu.edu.hk/~lwang/research/jcb2013.pdf.         Toggle abstract "Due to hybridization events in evolution, studying different genes of a set of species may yield two or more related but different phylogenetic trees for the set of species. In this case, we want to combine the trees into a reticulate network with the fewest hybridization events. In this article, we develop a software tool (named UltraNet) for several fundamental problems related to the construction of minimum reticulate networks from two or more phylogenetic trees. Our experimental results show that UltraNet is much faster than all previous tools for these problems. © 2013 Mary Ann Liebert, Inc."